Knowledge Base · Publications

Publications

Peer-reviewed publications and scientific contributions from our bioinformatics and computational biology team.

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Showing 25 of 25 publications PEER-REVIEWED CONTRIBUTION

Understanding Parkinson’s disease: current trends and its multifaceted complications

Sameer A. Chaudhary, Sapana S. Chaudhary, Sakshi Rawat

To compare transcriptome profiling (RNA-seq) between two wheat cultivars with different antioxidant activities and to clarify the differences between these two wheat cultivars.

Sameer A. Chaudhary, Sapana S. Chaudhary, Sakshi Rawat

Recent developments in the etiology, treatment, and potential therapeutic targets for Parkinson's disease: a focus on biochemistry.

Sapana Sameer Chaudhary, Sameer Chaudhary, Sakshi Rawat, Saieswari Natesan , Tanvee Pardeshi , Athanasios Alexiou, Ghulam MdAshraf

Computational Deciphering of Blast Resistance Genes in Rice

Sameer Akhtar Chaudhary, Malik M. Ahmad, Sapana Chaudhary, Sakshi Rawat, and Jayashri Prasanan

Next generation sequencing: A promising tool to explore the personalized medicine in understanding the neurodegenerative diseases

Gayatri Gawade, Sameer A Chaudhary, Sapana Chaudhary, Sakshi Rawat, Anwar L Bilgrami, Meghana Padwal

Proteo-Molecular Investigation of Cultivated Rice, Wild Rice, and Barley Provides Clues of Defense Responses against Rhizoctonia solani Infection

Md. Shamim, Divakar Sharma, Deepa Bisht, Rashmi Maurya, Mayank Kaashyap, Deepti Srivastava, Anurag Mishra, Deepak Kumar, Mahesh Kumar, Vijaya Naresh Juturu, N. A. Khan, Sameer Chaudhary, Raja Hussain , K. N. Singh

Galectins—Potential Therapeutic Targets for Neurodegenerative Disorders

Sapana Chaudhary, Sameer Chaudhary, Sakshi Rawat, Archana Kulkarni, Anwar L. Bilgrami, Asma Perveen, Badrah S.Alghamdi, Torki Al Zughaibi, Ghulam Md Ashraf, Mohammad Zubair Alam, Tabish Hussain

Mechanistic Understanding of PtyroneTM: A Plant based Natural Anti Diabetic Product

Yogesh Arun Dound, Sameer Chaudhary , Sapana Sameer Chaudhary , Sakshi Rawat,Mohammed H Alqarni,Malik M Ahmad,Mohammed H. Geesi,Ravej Alam

Molecular Mechanism and Role of Translational Values of Heat Shock Protein (HSP27) in Various Disease

Sameer Chaudhary, Sapana Sameer Chaudhary, Sakshi Rawat , Savneet Kaur , Bogireddy Devi , Malik M Ahmad , Zia Arshad , M. Mustafa, Manie M. Al Jedaie , Parvej Alam

Preventive Strategies for Management of COVID-19 Using Natural Molecules

Yogesh Arun Dound , Sameer Chaudhary ,Sapana Sameer Chaudhary, Malik M Ahmad , Mohammed H Geesi , Pravej Alam

c-Met as a potential therapeutic target in triple negative breast cancer

Sapana Sameer Chaudhary , SameerChoudhary ,SakshiRawat , GouriAhir , Anwar L. Bilgrami , Ghulam Md Ashraf

Sox2: A Regulatory Factor in Tumorigenesis and Metastasis

Sameer Chaudhary, Zeyaul Islam, Vijaya Mishra, Sakshi Rawat, Ghulam Md Ashraf, Prasanna R Kolatkar

Researching novel variants involved in Alzheimer’s disease via next generation sequencing variant analysis on RNA sequence data files

Bhagwat, B. Joshi, Sameer Chaudhary, T. Pardeshi, Shama Mujawar, S. Talware, S. Chakraborty, V. Kandale

Exploring The Pre-erythrocytic Stage Of The Malaria Parasite For Possible Target Proteins To Develop An Effective Vaccine And Looking Into Available Preventive Measures Against Malaria: Can SPECT And SPECT2 Act As Potential Targets For An Effective Vaccine?

Manas Joshi , Shama Mujawar

Terminalia arjuna: Alternative Treatment for Cardiovascular Diseases

Isha Zafar, R.K. Sharma, Shama Mujawar* , Sameer Choudhary Jyoti Vidyapeeth Women’s University, Jaipur and RASA Life Science Informatics, Pune.

In-silico study of small cell lung cancer based on protein structure and function: A new approach to mimic biological system

Nidhi Sood1, Sameer Chaudhary1, Tanvee Pardeshi1, Shama Mujawar1, Krishna Balaji Deshmukh1, Saba Afrin Sheikh1, Preety Sharma1

Docking studies of HIV-1 gp120 with natural compounds for prevention of HIV-1 entry

Akhil Jobby,Sameer Choudhary,Tanvee Ajit Pardeshi

RT-PCR More Sensitive to Nested PCR for Fast Detection Tuberculosis Infection

Arwind Kumar Shukala , Hemant Patil , Amol Raut, Sameer Chaudhary

Identification of Novel Inhibitors for Systemic Lupus Erythematosus by Targeting IFN-α and FCγR2A: A Structure Based pharmacophore Approach

Shama Mujawar, Tanvee Pardeshi, Sameer Chaudhary , Menka Batra ,Krishna Balaji Deshmukh , Sameer Raje , Ib Thobias ,Swetha pavani Rao

In-Silico Discovery of Novel Inhibitors Against PrP Protein (E196K, V203I and E211Q): Creutzfeldt Jakob Disease

Swetha Pavani Rao*Shama Mujawar, Sameer Chaudhary, Inigo Benze Thobias, RASA Life Science Informatics

A Novel, Selective Inhibitor of Hepatitis C Virus Targeted against the Viral RNA-Dependent RNA-Polymerase

Krishna Balaji Deshmukh , Shama Mujawar , Tanvee Ajit Pardeshi, Sameer Chaudhary , Preety Sharma, Ib Thobias, Saba Sheikh , Nidhi Sood

Study of Interaction between Wild type and Mutant HIV-1 protease and Cyclic Urea Inhibitor Using In Silico Techniques

Pardeshi

Bioinformatics to Help Understand Intrinsically Disordered Proteins

Sameer A. Chaudhary, Sapana S. Chaudhary, Sakshi Rawat

DSD: A Database Of SNP Associated Disease

Tanvee Ajit Pardeshi, Akhil Jobby, Sameer Chaudhary, Sapana Mehendale , Shweta Metkar , Vaibhav Kandale , Shama Mujawar , Apurva Patange

Insilico Identification Of Molecular Targets For Ajoene [Garlic Component] And Their Binding Mode Analysis

Dr Savita Deshmukh , Shivakumar B Madagi,Sameer Chaudhary

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